STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_3448Hypothetical protein; Evidence: No homology to any previously reported sequences. (157 aa)    
Predicted Functional Partners:
macB
Putative macrolide ABC transporter, fusion of ATP-binding and membrane domains; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.860
BBta_3449
Putative cation/heavy metal efflux system protein; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.841
BBta_3452
Putative cation/heavy metal efflux system protein; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.602
BBta_3453
Putative tolC outer membrane protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.594
BBta_5199
Putative permease of ABC transporter; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
 
 0.538
BBta_3450
Putative transposase; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.533
BBta_3451
Hypothetical protein; Transposase domain; Evidence: Similar to previously reported genes of unknown function.
       0.433
BBta_3004
Putative outer TolC membrane protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.427
BBta_3945
Putative outer membrane protein tolC precursor; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 8 : Outer membrane-associated.
  
 
 0.427
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.