STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBta_4635Putative exported protein of unknown function with small protein A domain (SmpA family); Evidence: Similar to previously reported genes of unknown function. (153 aa)    
Predicted Functional Partners:
bamD
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.883
bamA
Putative outer membrane protein of unknown function with surface antigen (D15) domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.808
bamA-2
Putative exported protein of unknown function with surface antigen domain; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.806
bamA-3
Putative protective surface antigen precursor (Outer membrane protein D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.799
BBta_4633
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
    0.784
BBta_4634
Basic FGF-repressed Zic binding protein domain; Evidence: Similar to previously reported genes of unknown function.
 
     0.760
BBta_0051
Transcriptional regulator, XRE family; Transcriptional regulator domain (HTH type); Evidence: Similar to previously reported genes of unknown function; Localization: 2 : Cytoplasmic.
 
     0.724
rpmF
LSU ribosomal protein L32P; Fragment; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the bacterial ribosomal protein bL32 family.
 
    0.712
BBta_1161
Evidence: Similar to previously reported genes of unknown function.
  
    0.702
BBta_4481
Putative Peptidylprolyl isomerase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.688
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.