STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_4792Putative Chitin deacetylase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (269 aa)    
Predicted Functional Partners:
BBta_4173
Putative beta-(1-3)-glucosyl transferase, ndvB-like protein; Localization: 5 : Inner membrane protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.564
BBta_4791
Putative magnesium transporter MgtE-like (divalent cation transporter Mg2+/Ni2+/Co2+); Acts as a magnesium transporter.
       0.557
BBta_4793
Putative polysaccharide deacetylase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    
0.554
BBta_1009
Putative Glycosyl transferase, family 2; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.539
BBta_3605
Putative Glycosyltransferase, possibly the catalytic subunit of a cellulose synthase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane.
  
  
 0.475
BBta_4790
Putative transcriptional regulator, XRE family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.464
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.