STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_4841Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein. (260 aa)    
Predicted Functional Partners:
BBta_4843
Putative ABC transporter (ATP-binding protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
 
 0.989
BBta_4844
Putative ABC transporter (substrate-binding protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.948
BBta_7645
Putative sulfonate ABC transporter, ATP binding protein; (ssuB/tauB/ycbE-like); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
 
 0.934
ssuB-4
Putative ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.927
ssuB
Putative sulfonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.897
BBta_4842
Putative ABC transporter (permease protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
   
0.826
BBta_6358
Putative sulfonate ABC transporter, substrate-binding protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.802
BBta_1865
Putative ABC transporter, substrate binding protein; Putative aliphatic sulfonates transporter; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.795
BBta_2507
Putative ABC transporter, substrate binding protein; Putative aliphatic sulfonates transporter; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 9 : Periplasmic.
 
  
 0.788
BBta_3302
Putative aliphatic sulfonates-binding protein precursor (SsuA protein); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.753
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.