STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_5567Transcriptional regulator ttuA (Tartrate utilization transcriptional regulator); Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
BBta_2111
Putative transcriptional regulatory protein, LysR family; Putative occR-like protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.762
BBta_2094
Putative Transcriptional regulatory protein, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.761
BBta_2175
Putative transcriptional regulatory protein, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.749
BBta_4434
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.
  
     0.726
BBta_1913
Transcriptional regulator, LysR family; Evidence: Function of strongly homologous gene; Belongs to the LysR transcriptional regulatory family.
  
     0.697
BBta_1838
Transcriptional regulator, LysR family; Evidence: Function of strongly homologous gene; PUBMED: 179968; Belongs to the LysR transcriptional regulatory family.
  
     0.685
BBta_5126
Putative transcriptional regulatory protein, LysR-family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.677
BBta_2662
Transcriptional regulator, LysR family; Fragment; Evidence: Function of strongly homologous gene; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.666
BBta_0620
Putative transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.
  
     0.663
BBta_1652
Transcriptional regulator, LysR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the LysR transcriptional regulatory family.
  
     0.660
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.