STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_5633Putative sugar-nucleotide epimerase/dehydratase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (312 aa)    
Predicted Functional Partners:
BBta_5635
Putative dTDP-glucose 4,6-dehydratase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.915
BBta_5634
Putative Phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.872
BBta_5641
Putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.868
BBta_5631
Putative sugar kinase /cytidylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.854
BBta_5632
Putative sugar-phosphate nucleotidyl transferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.845
BBta_1052
Putative glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.755
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
 0.707
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
   
 0.707
rpsS
SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.704
BBta_5658
Putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     0.703
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.