STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_6593Bacteriophage protein gp38 domain; Evidence: Similar to previously reported genes of unknown function. (109 aa)    
Predicted Functional Partners:
BBta_6594
Hypothetical protein; Evidence: No homology to any previously reported sequences.
       0.773
BBta_6595
Hypothetical protein; Evidence: No homology to any previously reported sequences.
       0.773
BBta_6596
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
       0.746
BBta_6592
Putative Mu-like prophage FluMu tail sheath protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.558
BBta_6597
ATP-dependent Clp protease proteolytic subunit ClpP; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.523
BBta_6598
Putative Phage portal protein, lambda family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.523
BBta_6599
Hypothetical protein; Evidence: No homology to any previously reported sequences.
       0.523
BBta_6600
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
       0.466
BBta_6591
Hypothetical protein; Evidence: No homology to any previously reported sequences.
       0.419
BBta_6601
Putative phage terminase large subunit; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.404
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.