STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_6895Glyoxalase family protein; Evidence: Function of homologous gene experimentally demonstrated in an other organism. (137 aa)    
Predicted Functional Partners:
BBta_2181
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
  
 0.774
BBta_6896
Evidence: Similar to previously reported genes of unknown function; Localization: 11 : Membrane.
  
    0.728
BBta_6897
RNA polymerase ECF-type sigma factor; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the sigma-70 factor family.
 
     0.575
BBta_6888
DGPF domain; modular protein; Evidence: Similar to previously reported genes of unknown function.
 
    0.557
BBta_6898
Hypothetical protein; A DGPF domain; Evidence: Similar to previously reported genes of unknown function.
  
    0.509
BBta_1794
Evidence: Similar to previously reported genes of unknown function.
  
    0.491
BBta_6785
Transcriptional regulator, ArsR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
    0.439
BBta_5249
Transcriptional regulator, ArsR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
    0.417
BBta_6889
Putative Glutathione S-transferase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    0.411
BBta_6290
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.400
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.