STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_6967Evidence: Similar to previously reported genes of unknown function. (279 aa)    
Predicted Functional Partners:
BBta_0115
Putative small heat shock protein; Putative HSP20-like chaperone; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the small heat shock protein (HSP20) family.
  
     0.662
BBta_6966
UPF0301 protein domain; Evidence: Similar to previously reported genes of unknown function; Belongs to the UPF0301 (AlgH) family.
 
     0.652
BBta_3497
Evidence: Similar to previously reported genes of unknown function.
  
     0.614
atpF
ATP synthase subunit B, membrane-bound, F0 sector; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.608
BBta_3047
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.600
BBta_1762
Evidence: Similar to previously reported genes of unknown function.
  
     0.599
BBta_6968
Putative polysaccharide export protein, PST family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
       0.562
BBta_4141
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.541
BBta_2312
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
  
     0.536
BBta_7608
Hypothetical protein; S-adenosyl-L-methionine (SAM)-dependent methyltransferase domain; Evidence: Similar to previously reported genes of unknown function.
  
     0.533
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.