STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_6996Putative permease; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 11 : Membrane. (372 aa)    
Predicted Functional Partners:
BBta_6997
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
       0.609
BBta_6995
Hypothetical protein; ErfK/YbiS/YcfS/YnhG precursor domain; Evidence: Similar to previously reported genes of unknown function.
  
  
 0.559
BBta_6994
Evidence: Similar to previously reported genes of unknown function.
       0.518
BBta_4585
Putative transport protein/permease; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 5 : Inner membrane protein.
 
     0.487
BBta_6998
Evidence: Similar to previously reported genes of unknown function.
       0.456
BBta_1853
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.409
BBta_1377
Putative HWE histidine kinase family protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.407
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.