STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_7526Hypothetical protein; Aminopeptidase domain; putative exported protein; Evidence: Similar to previously reported genes of unknown function. (318 aa)    
Predicted Functional Partners:
BBta_7524
Putative Spermidine synthase (methyl transferase); Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.956
BBta_6541
Hypothetical protein; Nuclease domain; Evidence: Similar to previously reported genes of unknown function.
    
 0.764
BBta_7525
Uncharacterized protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.744
otsB
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
     
 0.709
metH
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
  
 0.643
BBta_0554
Putative Peptidase, Caspase-like domain and TPR repeats; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.513
BBta_1763
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.468
BBta_7275
Hypothetical protein; TPR repeat precursor; Evidence: Similar to previously reported genes of unknown function.
  
 
 0.459
BBta_0026
Putative uridine kinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
   
 
  0.415
BBta_0453
Putative CbbX-like protein, containing AAA-ATPase domain; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.412
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.