STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_7711ParB-like partition protein domain; Evidence: Similar to previously reported genes of unknown function. (582 aa)    
Predicted Functional Partners:
BBta_1468
Putative plasmid stabilization protein; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.970
BBta_7705
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
     0.954
BBta_7403
Putative chromosome partitioning protein parB; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; PUBMED: 9054507.
 
     0.951
BBta_7316
Putative ParB-like nuclease; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
     0.859
BBta_7715
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.835
BBta_7718
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.833
BBta_7719
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.814
BBta_7717
Putative methylase/helicase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic.
 
     0.812
BBta_3327
Putative plasmid stabilization protein; Fragment; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.792
BBta_7414
Hypothetical protein; Evidence: Similar to previously reported genes of unknown function.
 
     0.780
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.