STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBta_7829Transcriptional regulator, DeoR family; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PUBMED: 2994018. (264 aa)    
Predicted Functional Partners:
BBta_6479
Putative 6-phosphofructokinase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.900
BBta_5753
Hypothetical protein; GCN5-related N-acetyltransferase domain; Evidence: Similar to previously reported genes of unknown function.
    
   0.626
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.622
glpD
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.595
glpD-2
L-erythritol 4-phosphate dehydrogenase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.589
glpD-3
Glycerol-3-phosphate dehydrogenase; Evidence: Function of homologous gene experimentally demonstrated in an other organism; Localization: 2 : Cytoplasmic.
 
  
 0.572
BBta_0487
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Localization: 2 : Cytoplasmic; Belongs to the TPP enzyme family.
 
  
 0.569
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN; Phosphotransferase enzyme IIA component; Evidence: Function of homologous gene experimentally demonstrated in an other organism.
 
  
 0.552
BBta_7828
Putative deoxyribose-phosphate aldolase (DERA); Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
     
 0.537
BBta_7827
Putative membrane-anchored aldehyde dehydrogenase protein; Evidence: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.
  
  
 0.529
Your Current Organism:
Bradyrhizobium sp. BTAi1
NCBI taxonomy Id: 288000
Other names: B. sp. BTAi1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.