Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AL038_00115 | AL038_03920 | DNA helicase. | Site-specific DNA-methyltransferase. | 0.642 |
AL038_00115 | AL038_03930 | DNA helicase. | Uncharacterized protein. | 0.428 |
AL038_00115 | AL038_12770 | DNA helicase. | Methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.426 |
AL038_00115 | AL038_14930 | DNA helicase. | Type_ISP_C domain-containing protein. | 0.727 |
AL038_00115 | AL038_15165 | DNA helicase. | Uncharacterized protein. | 0.433 |
AL038_00115 | AL038_15400 | DNA helicase. | Type I restriction endonuclease subunit M. | 0.536 |
AL038_03920 | AL038_00115 | Site-specific DNA-methyltransferase. | DNA helicase. | 0.642 |
AL038_03920 | AL038_14930 | Site-specific DNA-methyltransferase. | Type_ISP_C domain-containing protein. | 0.421 |
AL038_03920 | AL038_15400 | Site-specific DNA-methyltransferase. | Type I restriction endonuclease subunit M. | 0.515 |
AL038_03930 | AL038_00115 | Uncharacterized protein. | DNA helicase. | 0.428 |
AL038_12770 | AL038_00115 | Methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | DNA helicase. | 0.426 |
AL038_12770 | AL038_15400 | Methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | Type I restriction endonuclease subunit M. | 0.476 |
AL038_14930 | AL038_00115 | Type_ISP_C domain-containing protein. | DNA helicase. | 0.727 |
AL038_14930 | AL038_03920 | Type_ISP_C domain-containing protein. | Site-specific DNA-methyltransferase. | 0.421 |
AL038_14930 | AL038_15400 | Type_ISP_C domain-containing protein. | Type I restriction endonuclease subunit M. | 0.545 |
AL038_15165 | AL038_00115 | Uncharacterized protein. | DNA helicase. | 0.433 |
AL038_15165 | AL038_15400 | Uncharacterized protein. | Type I restriction endonuclease subunit M. | 0.401 |
AL038_15400 | AL038_00115 | Type I restriction endonuclease subunit M. | DNA helicase. | 0.536 |
AL038_15400 | AL038_03920 | Type I restriction endonuclease subunit M. | Site-specific DNA-methyltransferase. | 0.515 |
AL038_15400 | AL038_12770 | Type I restriction endonuclease subunit M. | Methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.476 |
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