Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_00990 | AL038_00995 | AL038_00990 | AL038_00995 | Methylenetetrahydromethanopterin dehydrogenase. | ATP-grasp domain-containing protein. | 0.950 |
AL038_00990 | AL038_03750 | AL038_00990 | AL038_03750 | Methylenetetrahydromethanopterin dehydrogenase. | GHMP kinase. | 0.792 |
AL038_00990 | AL038_10685 | AL038_00990 | AL038_10685 | Methylenetetrahydromethanopterin dehydrogenase. | Formylmethanofuran dehydrogenase subunit C. | 0.787 |
AL038_00990 | AL038_12605 | AL038_00990 | AL038_12605 | Methylenetetrahydromethanopterin dehydrogenase. | Uncharacterized protein. | 0.789 |
AL038_00990 | AL038_15295 | AL038_00990 | AL038_15295 | Methylenetetrahydromethanopterin dehydrogenase. | Formylmethanofuran dehydrogenase subunit A. | 0.786 |
AL038_00990 | Fae | AL038_00990 | AL038_08760 | Methylenetetrahydromethanopterin dehydrogenase. | Formaldehyde-activating enzyme. | 0.981 |
AL038_00990 | Fae-2 | AL038_00990 | AL038_13645 | Methylenetetrahydromethanopterin dehydrogenase. | Formaldehyde-activating enzyme. | 0.979 |
AL038_00990 | ffsA | AL038_00990 | AL038_10680 | Methylenetetrahydromethanopterin dehydrogenase. | Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family. | 0.789 |
AL038_00990 | glyA | AL038_00990 | AL038_08775 | Methylenetetrahydromethanopterin dehydrogenase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.901 |
AL038_00990 | mch | AL038_00990 | AL038_01000 | Methylenetetrahydromethanopterin dehydrogenase. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family. | 0.995 |
AL038_00995 | AL038_00990 | AL038_00995 | AL038_00990 | ATP-grasp domain-containing protein. | Methylenetetrahydromethanopterin dehydrogenase. | 0.950 |
AL038_00995 | AL038_03750 | AL038_00995 | AL038_03750 | ATP-grasp domain-containing protein. | GHMP kinase. | 0.792 |
AL038_00995 | AL038_10685 | AL038_00995 | AL038_10685 | ATP-grasp domain-containing protein. | Formylmethanofuran dehydrogenase subunit C. | 0.791 |
AL038_00995 | AL038_12605 | AL038_00995 | AL038_12605 | ATP-grasp domain-containing protein. | Uncharacterized protein. | 0.792 |
AL038_00995 | AL038_15295 | AL038_00995 | AL038_15295 | ATP-grasp domain-containing protein. | Formylmethanofuran dehydrogenase subunit A. | 0.792 |
AL038_00995 | Fae | AL038_00995 | AL038_08760 | ATP-grasp domain-containing protein. | Formaldehyde-activating enzyme. | 0.792 |
AL038_00995 | Fae-2 | AL038_00995 | AL038_13645 | ATP-grasp domain-containing protein. | Formaldehyde-activating enzyme. | 0.786 |
AL038_00995 | ffsA | AL038_00995 | AL038_10680 | ATP-grasp domain-containing protein. | Formylmethanofuran--tetrahydromethanopterin formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family. | 0.792 |
AL038_00995 | mch | AL038_00995 | AL038_01000 | ATP-grasp domain-containing protein. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family. | 0.975 |
AL038_03750 | AL038_00990 | AL038_03750 | AL038_00990 | GHMP kinase. | Methylenetetrahydromethanopterin dehydrogenase. | 0.792 |
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