STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL038_01315Catechol 2,3-dioxygenase. (306 aa)    
Predicted Functional Partners:
AL038_01325
Phenol hydroxylase.
 
 0.989
AL038_01330
Phenol hydroxylase.
 
  
  0.988
AL038_01280
Tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
 
 
  0.983
AL038_01305
2-hydroxymuconic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.983
AL038_01335
Phenol 2-monooxygenase.
 
  
  0.983
DmpE
2-oxopent-4-enoate hydratase.
 
  
 0.938
DmpH
4-oxalocrotonate decarboxylase.
 
  
 0.903
AL038_01345
Phenol hydroxylase.
     
  0.900
AL038_01320
Ferredoxin.
 
 
 
 0.893
AL038_01295
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
   
 0.880
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.