Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_01740 | AL038_01745 | AL038_01740 | AL038_01745 | Ribonuclease III. | Uncharacterized protein. | 0.794 |
AL038_01740 | LepB | AL038_01740 | AL038_01750 | Ribonuclease III. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.963 |
AL038_01740 | era | AL038_01740 | AL038_01735 | Ribonuclease III. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.987 |
AL038_01740 | lepA | AL038_01740 | AL038_01755 | Ribonuclease III. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.802 |
AL038_01745 | AL038_01740 | AL038_01745 | AL038_01740 | Uncharacterized protein. | Ribonuclease III. | 0.794 |
AL038_01745 | AL038_08035 | AL038_01745 | AL038_08035 | Uncharacterized protein. | TIGR02449 family protein. | 0.474 |
AL038_01745 | AL038_10620 | AL038_01745 | AL038_10620 | Uncharacterized protein. | Pilus assembly protein PilZ. | 0.420 |
AL038_01745 | AL038_11755 | AL038_01745 | AL038_11755 | Uncharacterized protein. | Uncharacterized protein. | 0.563 |
AL038_01745 | AL038_14890 | AL038_01745 | AL038_14890 | Uncharacterized protein. | Uncharacterized protein. | 0.486 |
AL038_01745 | AL038_16410 | AL038_01745 | AL038_16410 | Uncharacterized protein. | GspH domain-containing protein. | 0.599 |
AL038_01745 | AL038_17180 | AL038_01745 | AL038_17180 | Uncharacterized protein. | Uncharacterized protein. | 0.447 |
AL038_01745 | LepB | AL038_01745 | AL038_01750 | Uncharacterized protein. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.622 |
AL038_01745 | era | AL038_01745 | AL038_01735 | Uncharacterized protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.787 |
AL038_01745 | lepA | AL038_01745 | AL038_01755 | Uncharacterized protein. | Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.619 |
AL038_08035 | AL038_01745 | AL038_08035 | AL038_01745 | TIGR02449 family protein. | Uncharacterized protein. | 0.474 |
AL038_08035 | AL038_11755 | AL038_08035 | AL038_11755 | TIGR02449 family protein. | Uncharacterized protein. | 0.433 |
AL038_08035 | AL038_16410 | AL038_08035 | AL038_16410 | TIGR02449 family protein. | GspH domain-containing protein. | 0.476 |
AL038_10620 | AL038_01745 | AL038_10620 | AL038_01745 | Pilus assembly protein PilZ. | Uncharacterized protein. | 0.420 |
AL038_10620 | AL038_16410 | AL038_10620 | AL038_16410 | Pilus assembly protein PilZ. | GspH domain-containing protein. | 0.738 |
AL038_10620 | AL038_17180 | AL038_10620 | AL038_17180 | Pilus assembly protein PilZ. | Uncharacterized protein. | 0.427 |
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