STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL038_01910Peptide ABC transporter substrate-binding protein. (501 aa)    
Predicted Functional Partners:
AL038_12310
Peptide/nickel transport system permease protein.
 0.993
AL038_12305
ABC transporter permease.
 0.988
AL038_01680
Microcin ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.504
AL038_05990
Peptide ABC transporter substrate-binding protein.
  
     0.477
AL038_07175
Transport permease protein.
  
  
 0.473
AL038_11900
Microcin ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.443
AL038_11355
ABC transporter substrate-binding protein.
  
 
 0.423
AL038_13485
SBP_bac_5 domain-containing protein.
  
 
 0.423
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
   
 
  0.401
AL038_15595
Amino acid ABC transporter permease.
   
 
 0.400
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
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