Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AL038_01170 | AL038_10770 | AL038_01170 | AL038_10770 | Macrolide ABC transporter ATP-binding protein. | ABC transporter permease. | 0.855 |
| AL038_01170 | lolA | AL038_01170 | AL038_05270 | Macrolide ABC transporter ATP-binding protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.609 |
| AL038_02255 | AL038_10770 | AL038_02255 | AL038_10770 | DUF4398 domain-containing protein. | ABC transporter permease. | 0.481 |
| AL038_02255 | lolA | AL038_02255 | AL038_05270 | DUF4398 domain-containing protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.677 |
| AL038_04380 | lolA | AL038_04380 | AL038_05270 | N-acetylmuramoyl-L-alanine amidase. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.604 |
| AL038_10770 | AL038_01170 | AL038_10770 | AL038_01170 | ABC transporter permease. | Macrolide ABC transporter ATP-binding protein. | 0.855 |
| AL038_10770 | AL038_02255 | AL038_10770 | AL038_02255 | ABC transporter permease. | DUF4398 domain-containing protein. | 0.481 |
| AL038_10770 | bamA | AL038_10770 | AL038_15265 | ABC transporter permease. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.775 |
| AL038_10770 | bamD | AL038_10770 | AL038_07805 | ABC transporter permease. | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.635 |
| AL038_10770 | lolA | AL038_10770 | AL038_05270 | ABC transporter permease. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.891 |
| AL038_10770 | lolD | AL038_10770 | AL038_10765 | ABC transporter permease. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.996 |
| AL038_10770 | lptD | AL038_10770 | AL038_15665 | ABC transporter permease. | LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.462 |
| AL038_10770 | pal | AL038_10770 | AL038_06405 | ABC transporter permease. | Peptidoglycan-associated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.740 |
| bamA | AL038_10770 | AL038_15265 | AL038_10770 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | ABC transporter permease. | 0.775 |
| bamA | bamD | AL038_15265 | AL038_07805 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.965 |
| bamA | lolA | AL038_15265 | AL038_05270 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.734 |
| bamA | lptD | AL038_15265 | AL038_15665 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.820 |
| bamA | pal | AL038_15265 | AL038_06405 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Peptidoglycan-associated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.668 |
| bamD | AL038_10770 | AL038_07805 | AL038_10770 | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | ABC transporter permease. | 0.635 |
| bamD | bamA | AL038_07805 | AL038_15265 | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.965 |
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