STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UrtEUrea ABC transporter ATP-binding subunit UrtE. (231 aa)    
Predicted Functional Partners:
UrtC
Urea ABC transporter permease subunit UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
UrtB
Urea ABC transporter permease subunit UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
UrtA
Urea ABC transporter substrate-binding protein.
 
 
 0.965
LivM
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.963
AL038_11095
ABC transporter ATP-binding protein.
  
0.957
AL038_12515
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.953
UrtD
Urea ABC transporter ATP-binding protein UrtD.
 
 
0.876
AL038_01645
Mannose-1-phosphate guanyltransferase.
 
      0.807
AL038_10250
ABC transporter ATP-binding protein.
 
     0.752
AL038_11105
Branched-chain amino acid ABC transporter permease LivH; Belongs to the binding-protein-dependent transport system permease family.
  
 0.681
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.