Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_06120 | AL038_06750 | AL038_06120 | AL038_06750 | NAD(P)(+) transhydrogenase. | NAD-dependent protein deacylase. | 0.907 |
AL038_06120 | AL038_16270 | AL038_06120 | AL038_16270 | NAD(P)(+) transhydrogenase. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.905 |
AL038_06120 | AL038_16275 | AL038_06120 | AL038_16275 | NAD(P)(+) transhydrogenase. | NAD(P)(+) transhydrogenase. | 0.903 |
AL038_06120 | AL038_16280 | AL038_06120 | AL038_16280 | NAD(P)(+) transhydrogenase. | NAD(P) transhydrogenase subunit alpha. | 0.904 |
AL038_06120 | AceF | AL038_06120 | AL038_00880 | NAD(P)(+) transhydrogenase. | Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.959 |
AL038_06120 | cobB | AL038_06120 | AL038_06185 | NAD(P)(+) transhydrogenase. | NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. | 0.907 |
AL038_06120 | nadD | AL038_06120 | AL038_05080 | NAD(P)(+) transhydrogenase. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
AL038_06120 | nadE | AL038_06120 | AL038_04235 | NAD(P)(+) transhydrogenase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.914 |
AL038_06120 | nadK | AL038_06120 | AL038_11765 | NAD(P)(+) transhydrogenase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.903 |
AL038_06120 | nudC | AL038_06120 | AL038_02600 | NAD(P)(+) transhydrogenase. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.900 |
AL038_06750 | AL038_06120 | AL038_06750 | AL038_06120 | NAD-dependent protein deacylase. | NAD(P)(+) transhydrogenase. | 0.907 |
AL038_06750 | AL038_16270 | AL038_06750 | AL038_16270 | NAD-dependent protein deacylase. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.900 |
AL038_06750 | AL038_16275 | AL038_06750 | AL038_16275 | NAD-dependent protein deacylase. | NAD(P)(+) transhydrogenase. | 0.902 |
AL038_06750 | AL038_16280 | AL038_06750 | AL038_16280 | NAD-dependent protein deacylase. | NAD(P) transhydrogenase subunit alpha. | 0.904 |
AL038_06750 | cobB | AL038_06750 | AL038_06185 | NAD-dependent protein deacylase. | NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily. | 0.915 |
AL038_06750 | nadD | AL038_06750 | AL038_05080 | NAD-dependent protein deacylase. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.916 |
AL038_06750 | nadE | AL038_06750 | AL038_04235 | NAD-dependent protein deacylase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.944 |
AL038_06750 | nadK | AL038_06750 | AL038_11765 | NAD-dependent protein deacylase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.907 |
AL038_06750 | nudC | AL038_06750 | AL038_02600 | NAD-dependent protein deacylase. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.905 |
AL038_16270 | AL038_06120 | AL038_16270 | AL038_06120 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(P)(+) transhydrogenase. | 0.905 |
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