Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_03825 | AL038_08175 | AL038_03825 | AL038_08175 | Uncharacterized protein; Belongs to the UPF0149 family. | Uncharacterized protein. | 0.657 |
AL038_04640 | AL038_08175 | AL038_04640 | AL038_08175 | Vitellogenin domain-containing protein. | Uncharacterized protein. | 0.575 |
AL038_04640 | AL038_17030 | AL038_04640 | AL038_17030 | Vitellogenin domain-containing protein. | Histidine kinase domain-containing protein. | 0.773 |
AL038_04640 | AL038_17415 | AL038_04640 | AL038_17415 | Vitellogenin domain-containing protein. | DUF4340 domain-containing protein. | 0.697 |
AL038_07385 | AL038_08175 | AL038_07385 | AL038_08175 | Znf/thioredoxin_put domain-containing protein. | Uncharacterized protein. | 0.641 |
AL038_07385 | AL038_17455 | AL038_07385 | AL038_17455 | Znf/thioredoxin_put domain-containing protein. | Uncharacterized protein. | 0.462 |
AL038_07385 | MreD | AL038_07385 | AL038_17590 | Znf/thioredoxin_put domain-containing protein. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.527 |
AL038_08175 | AL038_03825 | AL038_08175 | AL038_03825 | Uncharacterized protein. | Uncharacterized protein; Belongs to the UPF0149 family. | 0.657 |
AL038_08175 | AL038_04640 | AL038_08175 | AL038_04640 | Uncharacterized protein. | Vitellogenin domain-containing protein. | 0.575 |
AL038_08175 | AL038_07385 | AL038_08175 | AL038_07385 | Uncharacterized protein. | Znf/thioredoxin_put domain-containing protein. | 0.641 |
AL038_08175 | AL038_08180 | AL038_08175 | AL038_08180 | Uncharacterized protein. | DUF58 domain-containing protein. | 0.773 |
AL038_08175 | AL038_08195 | AL038_08175 | AL038_08195 | Uncharacterized protein. | Uncharacterized protein. | 0.573 |
AL038_08175 | AL038_17030 | AL038_08175 | AL038_17030 | Uncharacterized protein. | Histidine kinase domain-containing protein. | 0.559 |
AL038_08175 | AL038_17415 | AL038_08175 | AL038_17415 | Uncharacterized protein. | DUF4340 domain-containing protein. | 0.558 |
AL038_08175 | AL038_17455 | AL038_08175 | AL038_17455 | Uncharacterized protein. | Uncharacterized protein. | 0.716 |
AL038_08175 | MreD | AL038_08175 | AL038_17590 | Uncharacterized protein. | Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. | 0.598 |
AL038_08175 | rtcA | AL038_08175 | AL038_08170 | Uncharacterized protein. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.530 |
AL038_08180 | AL038_08175 | AL038_08180 | AL038_08175 | DUF58 domain-containing protein. | Uncharacterized protein. | 0.773 |
AL038_08180 | rtcA | AL038_08180 | AL038_08170 | DUF58 domain-containing protein. | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.653 |
AL038_08195 | AL038_08175 | AL038_08195 | AL038_08175 | Uncharacterized protein. | Uncharacterized protein. | 0.573 |
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