Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_01570 | AL038_05950 | AL038_01570 | AL038_05950 | annotation not available | Uncharacterized protein. | 0.413 |
AL038_01570 | AL038_05955 | AL038_01570 | AL038_05955 | annotation not available | Uncharacterized protein. | 0.700 |
AL038_01570 | AL038_08290 | AL038_01570 | AL038_08290 | annotation not available | Transposase_31 domain-containing protein. | 0.674 |
AL038_01570 | AL038_14755 | AL038_01570 | AL038_14755 | annotation not available | Uncharacterized protein. | 0.730 |
AL038_04405 | AL038_08290 | AL038_04405 | AL038_08290 | Uncharacterized protein. | Transposase_31 domain-containing protein. | 0.543 |
AL038_04405 | AL038_14755 | AL038_04405 | AL038_14755 | Uncharacterized protein. | Uncharacterized protein. | 0.721 |
AL038_05950 | AL038_01570 | AL038_05950 | AL038_01570 | Uncharacterized protein. | annotation not available | 0.413 |
AL038_05950 | AL038_05955 | AL038_05950 | AL038_05955 | Uncharacterized protein. | Uncharacterized protein. | 0.600 |
AL038_05950 | AL038_08290 | AL038_05950 | AL038_08290 | Uncharacterized protein. | Transposase_31 domain-containing protein. | 0.643 |
AL038_05955 | AL038_01570 | AL038_05955 | AL038_01570 | Uncharacterized protein. | annotation not available | 0.700 |
AL038_05955 | AL038_05950 | AL038_05955 | AL038_05950 | Uncharacterized protein. | Uncharacterized protein. | 0.600 |
AL038_05955 | AL038_08290 | AL038_05955 | AL038_08290 | Uncharacterized protein. | Transposase_31 domain-containing protein. | 0.689 |
AL038_08280 | AL038_08290 | AL038_08280 | AL038_08290 | DUF2470 domain-containing protein. | Transposase_31 domain-containing protein. | 0.647 |
AL038_08280 | accA | AL038_08280 | AL038_08285 | DUF2470 domain-containing protein. | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. | 0.768 |
AL038_08280 | gpsA | AL038_08280 | AL038_08275 | DUF2470 domain-containing protein. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.773 |
AL038_08280 | lpxL | AL038_08280 | AL038_08295 | DUF2470 domain-containing protein. | Lipid A biosynthesis lauroyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). | 0.491 |
AL038_08280 | secB | AL038_08280 | AL038_08270 | DUF2470 domain-containing protein. | Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.678 |
AL038_08290 | AL038_01570 | AL038_08290 | AL038_01570 | Transposase_31 domain-containing protein. | annotation not available | 0.674 |
AL038_08290 | AL038_04405 | AL038_08290 | AL038_04405 | Transposase_31 domain-containing protein. | Uncharacterized protein. | 0.543 |
AL038_08290 | AL038_05950 | AL038_08290 | AL038_05950 | Transposase_31 domain-containing protein. | Uncharacterized protein. | 0.643 |
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