Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_07570 | AL038_08535 | AL038_07570 | AL038_08535 | Cysteine desulfurase. | SirA family protein; Belongs to the sulfur carrier protein TusA family. | 0.957 |
AL038_07570 | NifS | AL038_07570 | AL038_06475 | Cysteine desulfurase. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.910 |
AL038_07570 | iscS | AL038_07570 | AL038_07575 | Cysteine desulfurase. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.962 |
AL038_08535 | AL038_07570 | AL038_08535 | AL038_07570 | SirA family protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase. | 0.957 |
AL038_08535 | AL038_08540 | AL038_08535 | AL038_08540 | SirA family protein; Belongs to the sulfur carrier protein TusA family. | NADH dehydrogenase. | 0.954 |
AL038_08535 | NifS | AL038_08535 | AL038_06475 | SirA family protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.957 |
AL038_08535 | TusD | AL038_08535 | AL038_07480 | SirA family protein; Belongs to the sulfur carrier protein TusA family. | Sulfurtransferase TusD. | 0.974 |
AL038_08535 | iscS | AL038_08535 | AL038_07575 | SirA family protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.957 |
AL038_08540 | AL038_08535 | AL038_08540 | AL038_08535 | NADH dehydrogenase. | SirA family protein; Belongs to the sulfur carrier protein TusA family. | 0.954 |
AL038_08540 | TusD | AL038_08540 | AL038_07480 | NADH dehydrogenase. | Sulfurtransferase TusD. | 0.453 |
NifS | AL038_07570 | AL038_06475 | AL038_07570 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | Cysteine desulfurase. | 0.910 |
NifS | AL038_08535 | AL038_06475 | AL038_08535 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | SirA family protein; Belongs to the sulfur carrier protein TusA family. | 0.957 |
NifS | iscS | AL038_06475 | AL038_07575 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.910 |
TusD | AL038_08535 | AL038_07480 | AL038_08535 | Sulfurtransferase TusD. | SirA family protein; Belongs to the sulfur carrier protein TusA family. | 0.974 |
TusD | AL038_08540 | AL038_07480 | AL038_08540 | Sulfurtransferase TusD. | NADH dehydrogenase. | 0.453 |
iscS | AL038_07570 | AL038_07575 | AL038_07570 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | Cysteine desulfurase. | 0.962 |
iscS | AL038_08535 | AL038_07575 | AL038_08535 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | SirA family protein; Belongs to the sulfur carrier protein TusA family. | 0.957 |
iscS | NifS | AL038_07575 | AL038_06475 | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.910 |