Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_03235 | AL038_04815 | AL038_03235 | AL038_04815 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
AL038_03235 | AL038_05145 | AL038_03235 | AL038_05145 | Uncharacterized protein. | Histidine kinase. | 0.860 |
AL038_03235 | AL038_05195 | AL038_03235 | AL038_05195 | Uncharacterized protein. | Uncharacterized protein. | 0.985 |
AL038_03235 | AL038_07495 | AL038_03235 | AL038_07495 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
AL038_03235 | AL038_09255 | AL038_03235 | AL038_09255 | Uncharacterized protein. | Histidine kinase. | 0.983 |
AL038_03235 | AL038_13310 | AL038_03235 | AL038_13310 | Uncharacterized protein. | Hybrid sensor histidine kinase/response regulator. | 0.984 |
AL038_03235 | AL038_16555 | AL038_03235 | AL038_16555 | Uncharacterized protein. | Hybrid sensor histidine kinase/response regulator. | 0.987 |
AL038_03235 | AL038_17265 | AL038_03235 | AL038_17265 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.891 |
AL038_03235 | AL038_18065 | AL038_03235 | AL038_18065 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
AL038_03235 | NifL | AL038_03235 | AL038_03640 | Uncharacterized protein. | Nitrogen fixation negative regulator NifL. | 0.979 |
AL038_04815 | AL038_03235 | AL038_04815 | AL038_03235 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
AL038_04815 | AL038_05145 | AL038_04815 | AL038_05145 | Uncharacterized protein. | Histidine kinase. | 0.763 |
AL038_04815 | AL038_05195 | AL038_04815 | AL038_05195 | Uncharacterized protein. | Uncharacterized protein. | 0.974 |
AL038_04815 | AL038_07495 | AL038_04815 | AL038_07495 | Uncharacterized protein. | Uncharacterized protein. | 0.729 |
AL038_04815 | AL038_09255 | AL038_04815 | AL038_09255 | Uncharacterized protein. | Histidine kinase. | 0.951 |
AL038_04815 | AL038_13310 | AL038_04815 | AL038_13310 | Uncharacterized protein. | Hybrid sensor histidine kinase/response regulator. | 0.672 |
AL038_04815 | AL038_16555 | AL038_04815 | AL038_16555 | Uncharacterized protein. | Hybrid sensor histidine kinase/response regulator. | 0.964 |
AL038_04815 | AL038_17265 | AL038_04815 | AL038_17265 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.611 |
AL038_04815 | AL038_18065 | AL038_04815 | AL038_18065 | Uncharacterized protein. | Uncharacterized protein. | 0.959 |
AL038_04815 | NifL | AL038_04815 | AL038_03640 | Uncharacterized protein. | Nitrogen fixation negative regulator NifL. | 0.425 |
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