Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_11030 | AL038_12230 | AL038_11030 | AL038_12230 | Dinitrogenase reductase. | DNA repair protein. | 0.406 |
AL038_11030 | AL038_16800 | AL038_11030 | AL038_16800 | Dinitrogenase reductase. | Phytanoyl-CoA dioxygenase. | 0.446 |
AL038_11030 | AL038_17005 | AL038_11030 | AL038_17005 | Dinitrogenase reductase. | Uncharacterized protein. | 0.459 |
AL038_11030 | NifA | AL038_11030 | AL038_03635 | Dinitrogenase reductase. | Nif-specific transcriptional activator NifA. | 0.493 |
AL038_11030 | NifL | AL038_11030 | AL038_03640 | Dinitrogenase reductase. | Nitrogen fixation negative regulator NifL. | 0.470 |
AL038_11030 | kptA | AL038_11030 | AL038_00585 | Dinitrogenase reductase. | Probable RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.432 |
AL038_11030 | nifH | AL038_11030 | AL038_03755 | Dinitrogenase reductase. | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.516 |
AL038_11030 | trmL | AL038_11030 | AL038_11025 | Dinitrogenase reductase. | tRNA (cytidine(34)-2'-O)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.572 |
AL038_12230 | AL038_11030 | AL038_12230 | AL038_11030 | DNA repair protein. | Dinitrogenase reductase. | 0.406 |
AL038_12230 | AL038_17005 | AL038_12230 | AL038_17005 | DNA repair protein. | Uncharacterized protein. | 0.788 |
AL038_16800 | AL038_11030 | AL038_16800 | AL038_11030 | Phytanoyl-CoA dioxygenase. | Dinitrogenase reductase. | 0.446 |
AL038_16800 | AL038_17005 | AL038_16800 | AL038_17005 | Phytanoyl-CoA dioxygenase. | Uncharacterized protein. | 0.405 |
AL038_17005 | AL038_11030 | AL038_17005 | AL038_11030 | Uncharacterized protein. | Dinitrogenase reductase. | 0.459 |
AL038_17005 | AL038_12230 | AL038_17005 | AL038_12230 | Uncharacterized protein. | DNA repair protein. | 0.788 |
AL038_17005 | AL038_16800 | AL038_17005 | AL038_16800 | Uncharacterized protein. | Phytanoyl-CoA dioxygenase. | 0.405 |
NifA | AL038_11030 | AL038_03635 | AL038_11030 | Nif-specific transcriptional activator NifA. | Dinitrogenase reductase. | 0.493 |
NifA | NifL | AL038_03635 | AL038_03640 | Nif-specific transcriptional activator NifA. | Nitrogen fixation negative regulator NifL. | 0.976 |
NifA | nifH | AL038_03635 | AL038_03755 | Nif-specific transcriptional activator NifA. | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.635 |
NifL | AL038_11030 | AL038_03640 | AL038_11030 | Nitrogen fixation negative regulator NifL. | Dinitrogenase reductase. | 0.470 |
NifL | NifA | AL038_03640 | AL038_03635 | Nitrogen fixation negative regulator NifL. | Nif-specific transcriptional activator NifA. | 0.976 |
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