STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL038_11355ABC transporter substrate-binding protein. (597 aa)    
Predicted Functional Partners:
AL038_13485
SBP_bac_5 domain-containing protein.
  
  
 
0.908
AL038_16875
Microcin ABC transporter permease.
  
 0.848
AL038_16870
Peptide ABC transporter permease.
 
  
 0.812
AL038_11360
Endo/exonuclease/phosphatase domain-containing protein.
       0.773
AL038_11900
Microcin ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.722
AL038_01680
Microcin ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.717
AL038_11350
DUF2357 domain-containing protein.
       0.515
AL038_12310
Peptide/nickel transport system permease protein.
 
  
 0.479
AL038_01910
Peptide ABC transporter substrate-binding protein.
  
 
 0.423
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
Server load: low (12%) [HD]