Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_01545 | AL038_02020 | AL038_01545 | AL038_02020 | TPR_REGION domain-containing protein. | TPR_REGION domain-containing protein. | 0.442 |
AL038_01545 | AL038_11470 | AL038_01545 | AL038_11470 | TPR_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.553 |
AL038_01545 | AL038_17855 | AL038_01545 | AL038_17855 | TPR_REGION domain-containing protein. | TPR_REGION domain-containing protein. | 0.535 |
AL038_02020 | AL038_01545 | AL038_02020 | AL038_01545 | TPR_REGION domain-containing protein. | TPR_REGION domain-containing protein. | 0.442 |
AL038_02020 | AL038_11470 | AL038_02020 | AL038_11470 | TPR_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.599 |
AL038_02020 | AL038_14565 | AL038_02020 | AL038_14565 | TPR_REGION domain-containing protein. | CHAT domain-containing protein. | 0.502 |
AL038_02020 | alaS | AL038_02020 | AL038_10405 | TPR_REGION domain-containing protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.411 |
AL038_02045 | AL038_05945 | AL038_02045 | AL038_05945 | Deacetylase. | Uncharacterized protein. | 0.756 |
AL038_02045 | AL038_11470 | AL038_02045 | AL038_11470 | Deacetylase. | WD_REPEATS_REGION domain-containing protein. | 0.634 |
AL038_05945 | AL038_02045 | AL038_05945 | AL038_02045 | Uncharacterized protein. | Deacetylase. | 0.756 |
AL038_05945 | AL038_11470 | AL038_05945 | AL038_11470 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.564 |
AL038_05945 | rpoB | AL038_05945 | AL038_09585 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
AL038_05945 | rpoZ | AL038_05945 | AL038_03815 | Uncharacterized protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.962 |
AL038_11125 | AL038_11470 | AL038_11125 | AL038_11470 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.749 |
AL038_11125 | rpoB | AL038_11125 | AL038_09585 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.849 |
AL038_11125 | rpoZ | AL038_11125 | AL038_03815 | Uncharacterized protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.856 |
AL038_11470 | AL038_01545 | AL038_11470 | AL038_01545 | WD_REPEATS_REGION domain-containing protein. | TPR_REGION domain-containing protein. | 0.553 |
AL038_11470 | AL038_02020 | AL038_11470 | AL038_02020 | WD_REPEATS_REGION domain-containing protein. | TPR_REGION domain-containing protein. | 0.599 |
AL038_11470 | AL038_02045 | AL038_11470 | AL038_02045 | WD_REPEATS_REGION domain-containing protein. | Deacetylase. | 0.634 |
AL038_11470 | AL038_05945 | AL038_11470 | AL038_05945 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.564 |
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