Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AL038_08620 | AL038_12060 | PKS_ER domain-containing protein. | 12-oxophytodienoate reductase. | 0.568 |
AL038_12050 | AL038_12055 | Uncharacterized protein. | PLDc_N domain-containing protein. | 0.678 |
AL038_12050 | AL038_12060 | Uncharacterized protein. | 12-oxophytodienoate reductase. | 0.411 |
AL038_12055 | AL038_12050 | PLDc_N domain-containing protein. | Uncharacterized protein. | 0.678 |
AL038_12055 | AL038_12060 | PLDc_N domain-containing protein. | 12-oxophytodienoate reductase. | 0.459 |
AL038_12060 | AL038_08620 | 12-oxophytodienoate reductase. | PKS_ER domain-containing protein. | 0.568 |
AL038_12060 | AL038_12050 | 12-oxophytodienoate reductase. | Uncharacterized protein. | 0.411 |
AL038_12060 | AL038_12055 | 12-oxophytodienoate reductase. | PLDc_N domain-containing protein. | 0.459 |
AL038_12060 | AL038_12065 | 12-oxophytodienoate reductase. | Transcriptional regulator. | 0.539 |
AL038_12060 | AL038_12080 | 12-oxophytodienoate reductase. | Hydroxyacid dehydrogenase. | 0.486 |
AL038_12060 | AL038_13065 | 12-oxophytodienoate reductase. | Electron transfer flavoprotein subunit beta. | 0.619 |
AL038_12060 | AL038_13070 | 12-oxophytodienoate reductase. | Electron transfer flavoprotein subunit alpha. | 0.535 |
AL038_12065 | AL038_12060 | Transcriptional regulator. | 12-oxophytodienoate reductase. | 0.539 |
AL038_12080 | AL038_12060 | Hydroxyacid dehydrogenase. | 12-oxophytodienoate reductase. | 0.486 |
AL038_13065 | AL038_12060 | Electron transfer flavoprotein subunit beta. | 12-oxophytodienoate reductase. | 0.619 |
AL038_13065 | AL038_13070 | Electron transfer flavoprotein subunit beta. | Electron transfer flavoprotein subunit alpha. | 0.999 |
AL038_13070 | AL038_12060 | Electron transfer flavoprotein subunit alpha. | 12-oxophytodienoate reductase. | 0.535 |
AL038_13070 | AL038_13065 | Electron transfer flavoprotein subunit alpha. | Electron transfer flavoprotein subunit beta. | 0.999 |