Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_03155 | AL038_12430 | AL038_03155 | AL038_12430 | UPF0102 protein BLE401_02875; Belongs to the UPF0102 family. | ATP-dependent protease. | 0.742 |
AL038_03155 | AL038_13060 | AL038_03155 | AL038_13060 | UPF0102 protein BLE401_02875; Belongs to the UPF0102 family. | Pribosyltran domain-containing protein. | 0.742 |
AL038_03155 | AL038_15550 | AL038_03155 | AL038_15550 | UPF0102 protein BLE401_02875; Belongs to the UPF0102 family. | DNA internalization-related competence protein ComEC/Rec2. | 0.411 |
AL038_03155 | DprA | AL038_03155 | AL038_13190 | UPF0102 protein BLE401_02875; Belongs to the UPF0102 family. | DNA protecting protein DprA. | 0.604 |
AL038_12425 | AL038_12430 | AL038_12425 | AL038_12430 | Uncharacterized protein. | ATP-dependent protease. | 0.693 |
AL038_12425 | AL038_12435 | AL038_12425 | AL038_12435 | Uncharacterized protein. | Uncharacterized protein. | 0.693 |
AL038_12425 | AL038_12440 | AL038_12425 | AL038_12440 | Uncharacterized protein. | Uncharacterized protein. | 0.463 |
AL038_12430 | AL038_03155 | AL038_12430 | AL038_03155 | ATP-dependent protease. | UPF0102 protein BLE401_02875; Belongs to the UPF0102 family. | 0.742 |
AL038_12430 | AL038_12425 | AL038_12430 | AL038_12425 | ATP-dependent protease. | Uncharacterized protein. | 0.693 |
AL038_12430 | AL038_12435 | AL038_12430 | AL038_12435 | ATP-dependent protease. | Uncharacterized protein. | 0.816 |
AL038_12430 | AL038_12440 | AL038_12430 | AL038_12440 | ATP-dependent protease. | Uncharacterized protein. | 0.510 |
AL038_12430 | AL038_13060 | AL038_12430 | AL038_13060 | ATP-dependent protease. | Pribosyltran domain-containing protein. | 0.814 |
AL038_12430 | AL038_15550 | AL038_12430 | AL038_15550 | ATP-dependent protease. | DNA internalization-related competence protein ComEC/Rec2. | 0.617 |
AL038_12430 | DprA | AL038_12430 | AL038_13190 | ATP-dependent protease. | DNA protecting protein DprA. | 0.901 |
AL038_12430 | def | AL038_12430 | AL038_01705 | ATP-dependent protease. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.757 |
AL038_12430 | ruvC | AL038_12430 | AL038_04805 | ATP-dependent protease. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.450 |
AL038_12435 | AL038_12425 | AL038_12435 | AL038_12425 | Uncharacterized protein. | Uncharacterized protein. | 0.693 |
AL038_12435 | AL038_12430 | AL038_12435 | AL038_12430 | Uncharacterized protein. | ATP-dependent protease. | 0.816 |
AL038_12435 | AL038_12440 | AL038_12435 | AL038_12440 | Uncharacterized protein. | Uncharacterized protein. | 0.510 |
AL038_12440 | AL038_12425 | AL038_12440 | AL038_12425 | Uncharacterized protein. | Uncharacterized protein. | 0.463 |
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