Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_12680 | AL038_12685 | AL038_12680 | AL038_12685 | Uncharacterized protein. | TMP-TENI domain-containing protein. | 0.519 |
AL038_12680 | RluC | AL038_12680 | AL038_12690 | Uncharacterized protein. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.483 |
AL038_12685 | AL038_12680 | AL038_12685 | AL038_12680 | TMP-TENI domain-containing protein. | Uncharacterized protein. | 0.519 |
AL038_12685 | MoeB | AL038_12685 | AL038_08085 | TMP-TENI domain-containing protein. | Molybdopterin-synthase adenylyltransferase MoeB. | 0.402 |
AL038_12685 | MoeB-2 | AL038_12685 | AL038_12665 | TMP-TENI domain-containing protein. | Molybdopterin-synthase adenylyltransferase MoeB. | 0.402 |
AL038_12685 | RluC | AL038_12685 | AL038_12690 | TMP-TENI domain-containing protein. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.723 |
AL038_12685 | ThiD | AL038_12685 | AL038_15585 | TMP-TENI domain-containing protein. | Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase. | 0.917 |
AL038_12685 | ThiS | AL038_12685 | AL038_07150 | TMP-TENI domain-containing protein. | Thiamine biosynthesis protein ThiS. | 0.749 |
AL038_12685 | ribB | AL038_12685 | AL038_02475 | TMP-TENI domain-containing protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.408 |
AL038_12685 | thiC | AL038_12685 | AL038_03175 | TMP-TENI domain-containing protein. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.664 |
AL038_12685 | thiG | AL038_12685 | AL038_07155 | TMP-TENI domain-containing protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.918 |
AL038_12685 | thiM | AL038_12685 | AL038_15580 | TMP-TENI domain-containing protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.930 |
MoeB | AL038_12685 | AL038_08085 | AL038_12685 | Molybdopterin-synthase adenylyltransferase MoeB. | TMP-TENI domain-containing protein. | 0.402 |
MoeB | MoeB-2 | AL038_08085 | AL038_12665 | Molybdopterin-synthase adenylyltransferase MoeB. | Molybdopterin-synthase adenylyltransferase MoeB. | 0.905 |
MoeB | ThiD | AL038_08085 | AL038_15585 | Molybdopterin-synthase adenylyltransferase MoeB. | Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase. | 0.541 |
MoeB | ThiS | AL038_08085 | AL038_07150 | Molybdopterin-synthase adenylyltransferase MoeB. | Thiamine biosynthesis protein ThiS. | 0.769 |
MoeB | thiC | AL038_08085 | AL038_03175 | Molybdopterin-synthase adenylyltransferase MoeB. | Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.720 |
MoeB | thiG | AL038_08085 | AL038_07155 | Molybdopterin-synthase adenylyltransferase MoeB. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.853 |
MoeB-2 | AL038_12685 | AL038_12665 | AL038_12685 | Molybdopterin-synthase adenylyltransferase MoeB. | TMP-TENI domain-containing protein. | 0.402 |
MoeB-2 | MoeB | AL038_12665 | AL038_08085 | Molybdopterin-synthase adenylyltransferase MoeB. | Molybdopterin-synthase adenylyltransferase MoeB. | 0.905 |
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