STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL038_12920Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
AL038_13635
Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
      0.898
AL038_02830
Chemotaxis protein CheR.
      0.891
AL038_02835
Protein-glutamate methylesterase.
      0.875
AL038_06970
Uncharacterized protein.
 
 0.825
AL038_17650
Sigma-54-dependent Fis family transcriptional regulator.
 
      0.744
AL038_06340
Uncharacterized protein.
 
 
 0.708
AL038_13225
Two-component system response regulator BaeR.
  
     0.706
KdpE
Two-component system response regulator KdpE.
  
     0.687
AL038_05340
Uncharacterized protein.
  
 
 0.659
AL038_17310
Uncharacterized protein.
 
 
 0.639
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
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