STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AL038_13210Asparagine synthase (Glutamine-hydrolyzing). (590 aa)    
Predicted Functional Partners:
AsnB
Asparagine synthase (Glutamine-hydrolyzing).
  
  
 
0.923
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.913
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.912
AL038_05605
Asparaginase.
     
 0.908
AL038_17565
Uncharacterized protein.
     
 0.907
AL038_02135
Aminotransferase.
     
 0.904
AL038_02675
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.849
AL038_13205
Transposase_31 domain-containing protein.
       0.565
AL038_02905
Carrier domain-containing protein.
 
  
 0.477
Your Current Organism:
Beggiatoa leptomitoformis
NCBI taxonomy Id: 288004
Other names: B. leptomitoformis, Beggiatoa leptomitiformis, Beggiatoa leptomitoformis Dubinina et al. 2017, Beggiatoa sp. D-402, DSM 14946, UNIQEM U 779, strain D-402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.