Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_02870 | HemJ | AL038_02870 | AL038_15815 | Radical SAM protein. | TIGR00701 family protein. | 0.910 |
AL038_02870 | HemN | AL038_02870 | AL038_12660 | Radical SAM protein. | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.919 |
AL038_02870 | hemF | AL038_02870 | AL038_06730 | Radical SAM protein. | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.916 |
AL038_11170 | HemJ | AL038_11170 | AL038_15815 | Uncharacterized protein. | TIGR00701 family protein. | 0.408 |
HemJ | AL038_02870 | AL038_15815 | AL038_02870 | TIGR00701 family protein. | Radical SAM protein. | 0.910 |
HemJ | AL038_11170 | AL038_15815 | AL038_11170 | TIGR00701 family protein. | Uncharacterized protein. | 0.408 |
HemJ | HemN | AL038_15815 | AL038_12660 | TIGR00701 family protein. | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.910 |
HemJ | hemF | AL038_15815 | AL038_06730 | TIGR00701 family protein. | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.950 |
HemJ | hemH | AL038_15815 | AL038_00935 | TIGR00701 family protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.939 |
HemN | AL038_02870 | AL038_12660 | AL038_02870 | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Radical SAM protein. | 0.919 |
HemN | HemJ | AL038_12660 | AL038_15815 | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | TIGR00701 family protein. | 0.910 |
HemN | hemF | AL038_12660 | AL038_06730 | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.916 |
hemF | AL038_02870 | AL038_06730 | AL038_02870 | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | Radical SAM protein. | 0.916 |
hemF | HemJ | AL038_06730 | AL038_15815 | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | TIGR00701 family protein. | 0.950 |
hemF | HemN | AL038_06730 | AL038_12660 | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | Coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.916 |
hemF | hemH | AL038_06730 | AL038_00935 | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.647 |
hemH | HemJ | AL038_00935 | AL038_15815 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | TIGR00701 family protein. | 0.939 |
hemH | hemF | AL038_00935 | AL038_06730 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.647 |