Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AL038_03380 | AL038_10000 | AL038_03380 | AL038_10000 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.907 |
AL038_03380 | AL038_13015 | AL038_03380 | AL038_13015 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase. | 0.959 |
AL038_03380 | AceB | AL038_03380 | AL038_17865 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Malate synthase; Belongs to the malate synthase family. | 0.920 |
AL038_03380 | Acs | AL038_03380 | AL038_07675 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA synthetase. | 0.931 |
AL038_03380 | prpB | AL038_03380 | AL038_18040 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.826 |
AL038_03380 | sucC | AL038_03380 | AL038_16365 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Succinate--CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.828 |
AL038_03380 | sucD | AL038_03380 | AL038_16370 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.834 |
AL038_10000 | AL038_03380 | AL038_10000 | AL038_03380 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.907 |
AL038_10000 | AL038_13015 | AL038_10000 | AL038_13015 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase. | 0.959 |
AL038_10000 | AceB | AL038_10000 | AL038_17865 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Malate synthase; Belongs to the malate synthase family. | 0.920 |
AL038_10000 | Acs | AL038_10000 | AL038_07675 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA synthetase. | 0.931 |
AL038_10000 | prpB | AL038_10000 | AL038_18040 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.826 |
AL038_10000 | sucC | AL038_10000 | AL038_16365 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Succinate--CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.828 |
AL038_10000 | sucD | AL038_10000 | AL038_16370 | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.834 |
AL038_13015 | AL038_03380 | AL038_13015 | AL038_03380 | Enoyl-CoA hydratase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.959 |
AL038_13015 | AL038_10000 | AL038_13015 | AL038_10000 | Enoyl-CoA hydratase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.959 |
AL038_13015 | AceB | AL038_13015 | AL038_17865 | Enoyl-CoA hydratase. | Malate synthase; Belongs to the malate synthase family. | 0.992 |
AL038_13015 | Acs | AL038_13015 | AL038_07675 | Enoyl-CoA hydratase. | Acetyl-CoA synthetase. | 0.949 |
AL038_13015 | PrpC | AL038_13015 | AL038_18035 | Enoyl-CoA hydratase. | Citrate synthase; Belongs to the citrate synthase family. | 0.967 |
AL038_13015 | prpB | AL038_13015 | AL038_18040 | Enoyl-CoA hydratase. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.842 |
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