STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY21777.1Epoxide hydrolase. (263 aa)    
Predicted Functional Partners:
ABY21996.1
Hydrolase, alpha/beta fold superfamily.
  
     0.768
ABY21776.1
Glutamate racemase.
       0.714
ABY21780.1
FAD/FMN-containing dehydrogenase.
     0.698
ABY24265.1
Heterocyst glycolipid synthase.
  
 
 0.633
ABY23130.1
Haloacetate dehalogenase H-1.
  
     0.627
ABY21779.1
Hypothetical protein.
 
     0.562
ABY25055.1
Cyclohexanone monooxygenase.
  
 
 0.512
ABY21778.1
Transcriptional regulator, TetR family.
       0.501
ABY24261.1
Cyclohexanone monooxygenase; Partial, N-terminus.
  
   0.471
ABY24270.1
Putative hydrolase.
  
     0.463
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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