Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY21830.1 | ABY21831.1 | RSal33209_0074 | RSal33209_0075 | ATP-dependent helicase; Partial, N-terminus. | ATP-dependent helicase. | 0.986 |
ABY21830.1 | ABY21832.1 | RSal33209_0074 | RSal33209_0076 | ATP-dependent helicase; Partial, N-terminus. | ATP-dependent helicase; Partial, C-terminus. | 0.986 |
ABY21830.1 | ABY21834.1 | RSal33209_0074 | RSal33209_0078 | ATP-dependent helicase; Partial, N-terminus. | formamidopyrimidine-DNA glycosylase. | 0.881 |
ABY21830.1 | ABY22223.1 | RSal33209_0074 | RSal33209_0473 | ATP-dependent helicase; Partial, N-terminus. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.459 |
ABY21830.1 | ABY22628.1 | RSal33209_0074 | RSal33209_0885 | ATP-dependent helicase; Partial, N-terminus. | Putative DNA glycosidase. | 0.455 |
ABY21830.1 | ABY23375.1 | RSal33209_0074 | RSal33209_1639 | ATP-dependent helicase; Partial, N-terminus. | Predicted amidophosphoribosyltransferase. | 0.439 |
ABY21830.1 | ABY24986.1 | RSal33209_0074 | RSal33209_3272 | ATP-dependent helicase; Partial, N-terminus. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.582 |
ABY21830.1 | mutM | RSal33209_0074 | RSal33209_1774 | ATP-dependent helicase; Partial, N-terminus. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.459 |
ABY21830.1 | radA | RSal33209_0074 | RSal33209_3178 | ATP-dependent helicase; Partial, N-terminus. | DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.508 |
ABY21830.1 | uvrC | RSal33209_0074 | RSal33209_2276 | ATP-dependent helicase; Partial, N-terminus. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.455 |
ABY21831.1 | ABY21830.1 | RSal33209_0075 | RSal33209_0074 | ATP-dependent helicase. | ATP-dependent helicase; Partial, N-terminus. | 0.986 |
ABY21831.1 | ABY21832.1 | RSal33209_0075 | RSal33209_0076 | ATP-dependent helicase. | ATP-dependent helicase; Partial, C-terminus. | 0.994 |
ABY21831.1 | ABY21834.1 | RSal33209_0075 | RSal33209_0078 | ATP-dependent helicase. | formamidopyrimidine-DNA glycosylase. | 0.865 |
ABY21831.1 | ABY22223.1 | RSal33209_0075 | RSal33209_0473 | ATP-dependent helicase. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.459 |
ABY21831.1 | ABY22628.1 | RSal33209_0075 | RSal33209_0885 | ATP-dependent helicase. | Putative DNA glycosidase. | 0.591 |
ABY21831.1 | ABY23375.1 | RSal33209_0075 | RSal33209_1639 | ATP-dependent helicase. | Predicted amidophosphoribosyltransferase. | 0.439 |
ABY21831.1 | ABY24986.1 | RSal33209_0075 | RSal33209_3272 | ATP-dependent helicase. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.525 |
ABY21831.1 | mutM | RSal33209_0075 | RSal33209_1774 | ATP-dependent helicase. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.459 |
ABY21831.1 | radA | RSal33209_0075 | RSal33209_3178 | ATP-dependent helicase. | DNA repair protein; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.508 |
ABY21831.1 | uvrC | RSal33209_0075 | RSal33209_2276 | ATP-dependent helicase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.455 |
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