STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY21841.13-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (267 aa)    
Predicted Functional Partners:
ABY21840.1
glutaryl-CoA dehydrogenase.
  
  0.821
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
  
   0.621
ABY25257.1
Hypothetical protein.
    
 0.621
ABY21839.1
3-oxoacyl-[acyl-carrier-protein] synthase III; Partial, N-terminus.
       0.618
ABY21838.1
3-oxoacyl-[acyl-carrier-protein] synthase III; Partial, C-terminus.
  
  
 0.610
ABY24383.1
phenylacetyl-CoA 2-monooxygenase electron transfer component.
   
 
 0.585
ABY24259.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.551
ABY21843.1
Predicted glycosyl hydrolase.
       0.550
ABY23230.1
DNA repair exonuclease.
    
   0.548
ABY21842.1
Hypothetical protein.
       0.543
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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