STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY21871.1ABC-type sugar transport system, permease component. (144 aa)    
Predicted Functional Partners:
ABY21872.1
ABC-type sugar transport system, permease component; Partial, C-terminus.
     0.978
ABY21873.1
ABC-type sugar transport system, periplasmic component.
 
  0.969
ABY21870.1
ABC-type sugar transport system, permease component; Partial, C-terminus.
 
 
 0.903
ABY22195.1
Sugar transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.890
ABY21869.1
ABC-type sugar transport system, permease component.
 
 
 0.887
ABY22755.1
ABC transporter sugar permease.
 
 
 0.878
ABY23442.1
Sugar transport system permease; Partial, C-terminus.
 
 
 0.875
ugpA
SN-glycerol-3-phosphate transport system permease protein.
 
 
 0.875
ABY25121.1
Sugar transport system permease protein.
 
 
 0.875
ABY22738.1
ABC-type sugar transport system, permease component.
 
 
 0.857
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.