STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livH.1Branched-chain amino acid transport system permease protein; Partial, N-terminus; Belongs to the binding-protein-dependent transport system permease family. (127 aa)    
Predicted Functional Partners:
livH.2
Branched-chain amino acid transport system permease protein; Partial, C-terminus; Belongs to the binding-protein-dependent transport system permease family.
     0.994
livM
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.987
livG
Branched-chain amino acid transport ATP-binding protein.
 
  
 0.977
livF
Branched-chain amino acid transport ATP-binding protein.
 
  
 0.976
ABY22003.1
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
  
 0.956
dppD
Dipeptide transport ATP-binding protein.
  
  
 0.553
ABY23395.1
Dipeptide transport ATP-binding protein; Partial, C-terminus; Belongs to the ABC transporter superfamily.
  
  
 0.553
dppF.2
Dipeptide transport ATP-binding protein.
  
  
 0.553
ABY24048.1
Oligopeptide transport ATP-binding protein.
  
  
 0.553
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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