Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22019.1 | ABY22020.1 | RSal33209_0263 | RSal33209_0264 | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | L-arabinose transport ATP-binding protein. | 0.997 |
ABY22019.1 | ABY22021.1 | RSal33209_0263 | RSal33209_0265 | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Glucokinase; Xylose repressor. | 0.544 |
ABY22019.1 | ABY24880.1 | RSal33209_0263 | RSal33209_3162 | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Sugar transport ATP-binding protein. | 0.723 |
ABY22019.1 | chvE | RSal33209_0263 | RSal33209_0262 | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Multiple sugar-binding protein. | 0.983 |
ABY22020.1 | ABY22019.1 | RSal33209_0264 | RSal33209_0263 | L-arabinose transport ATP-binding protein. | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.997 |
ABY22020.1 | ABY22021.1 | RSal33209_0264 | RSal33209_0265 | L-arabinose transport ATP-binding protein. | Glucokinase; Xylose repressor. | 0.550 |
ABY22020.1 | chvE | RSal33209_0264 | RSal33209_0262 | L-arabinose transport ATP-binding protein. | Multiple sugar-binding protein. | 0.976 |
ABY22021.1 | ABY22019.1 | RSal33209_0265 | RSal33209_0263 | Glucokinase; Xylose repressor. | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.544 |
ABY22021.1 | ABY22020.1 | RSal33209_0265 | RSal33209_0264 | Glucokinase; Xylose repressor. | L-arabinose transport ATP-binding protein. | 0.550 |
ABY22021.1 | chvE | RSal33209_0265 | RSal33209_0262 | Glucokinase; Xylose repressor. | Multiple sugar-binding protein. | 0.514 |
ABY24880.1 | ABY22019.1 | RSal33209_3162 | RSal33209_0263 | Sugar transport ATP-binding protein. | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.723 |
chvE | ABY22019.1 | RSal33209_0262 | RSal33209_0263 | Multiple sugar-binding protein. | L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.983 |
chvE | ABY22020.1 | RSal33209_0262 | RSal33209_0264 | Multiple sugar-binding protein. | L-arabinose transport ATP-binding protein. | 0.976 |
chvE | ABY22021.1 | RSal33209_0262 | RSal33209_0265 | Multiple sugar-binding protein. | Glucokinase; Xylose repressor. | 0.514 |