STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22289.1Hypothetical membrane protein. (142 aa)    
Predicted Functional Partners:
ABY22290.1
Sodium/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.997
ABY22285.1
Sodium/proline transporter; Partial, N-terminus; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.945
ABY22284.1
Sodium/proline transporter; Partial, C-terminus; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.939
ABY22286.1
Hypothetical protein.
 
     0.643
ABY22287.1
Two-component response regulator.
       0.592
ABY22288.1
Sensor kinase.
       0.592
ABY23578.1
Acetyl-coenzyme A synthetase; Partial, N-terminus.
 
  
 0.577
ABY23579.1
Acetyl-coenzyme A synthetase; Partial, C-terminus.
 
  
 0.570
ABY21925.1
Malate synthase; Partial, C-terminus.
   
    0.519
ABY21926.1
Malate synthase; Partial, N-terminus; Belongs to the malate synthase family.
   
    0.519
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.