Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22381.1 | ABY22383.1 | RSal33209_0634 | RSal33209_0636 | Predicted permease. | Membrane endopeptidase, M50 family. | 0.625 |
ABY22381.1 | ABY22384.1 | RSal33209_0634 | RSal33209_0637 | Predicted permease. | Hypothetical protein. | 0.496 |
ABY22381.1 | ABY22385.1 | RSal33209_0634 | RSal33209_0638 | Predicted permease. | Hypothetical membrane protein. | 0.400 |
ABY22381.1 | dxr | RSal33209_0634 | RSal33209_0635 | Predicted permease. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.773 |
ABY22383.1 | ABY22381.1 | RSal33209_0636 | RSal33209_0634 | Membrane endopeptidase, M50 family. | Predicted permease. | 0.625 |
ABY22383.1 | ABY22384.1 | RSal33209_0636 | RSal33209_0637 | Membrane endopeptidase, M50 family. | Hypothetical protein. | 0.618 |
ABY22383.1 | ABY22385.1 | RSal33209_0636 | RSal33209_0638 | Membrane endopeptidase, M50 family. | Hypothetical membrane protein. | 0.489 |
ABY22383.1 | ABY22386.1 | RSal33209_0636 | RSal33209_0639 | Membrane endopeptidase, M50 family. | Hypothetical membrane protein. | 0.524 |
ABY22383.1 | ABY22387.1 | RSal33209_0636 | RSal33209_0640 | Membrane endopeptidase, M50 family. | Conserved hypothetical protein. | 0.424 |
ABY22383.1 | dxr | RSal33209_0636 | RSal33209_0635 | Membrane endopeptidase, M50 family. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.936 |
ABY22383.1 | ispG | RSal33209_0636 | RSal33209_0641 | Membrane endopeptidase, M50 family. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.499 |
ABY22384.1 | ABY22381.1 | RSal33209_0637 | RSal33209_0634 | Hypothetical protein. | Predicted permease. | 0.496 |
ABY22384.1 | ABY22383.1 | RSal33209_0637 | RSal33209_0636 | Hypothetical protein. | Membrane endopeptidase, M50 family. | 0.618 |
ABY22384.1 | ABY22385.1 | RSal33209_0637 | RSal33209_0638 | Hypothetical protein. | Hypothetical membrane protein. | 0.603 |
ABY22384.1 | ABY22386.1 | RSal33209_0637 | RSal33209_0639 | Hypothetical protein. | Hypothetical membrane protein. | 0.653 |
ABY22384.1 | ABY22387.1 | RSal33209_0637 | RSal33209_0640 | Hypothetical protein. | Conserved hypothetical protein. | 0.432 |
ABY22384.1 | dxr | RSal33209_0637 | RSal33209_0635 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.496 |
ABY22385.1 | ABY22381.1 | RSal33209_0638 | RSal33209_0634 | Hypothetical membrane protein. | Predicted permease. | 0.400 |
ABY22385.1 | ABY22383.1 | RSal33209_0638 | RSal33209_0636 | Hypothetical membrane protein. | Membrane endopeptidase, M50 family. | 0.489 |
ABY22385.1 | ABY22384.1 | RSal33209_0638 | RSal33209_0637 | Hypothetical membrane protein. | Hypothetical protein. | 0.603 |
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