STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22577.1D-aminoacylase; Partial, C-terminus. (304 aa)    
Predicted Functional Partners:
ABY22576.1
D-aminoacylase; Partial, N-terminus.
     0.989
ABY22575.1
Putative D-amino acid deaminase.
 
   
 0.925
ABY22574.1
2-dehydro-3-deoxygluconokinase.
     0.818
ABY22607.1
Amidohydrolase-like protein.
 
     0.753
ABY22578.1
2-dehydro-3-deoxyphosphogluconate aldolase.
 
     0.723
ABY22579.1
Gluconate transporter; Partial, N-terminus.
       0.625
ABY22580.1
Gluconate transporter; Partial, C-terminus.
       0.599
ABY22572.1
Translation initiation inhibitor.
 
     0.514
ABY22573.1
Transcriptional regulator, IclR family.
 
     0.456
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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