Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22151.1 | ABY22487.1 | RSal33209_0397 | RSal33209_0740 | DNA polymerase III, delta' subunit. | Hypothetical protein. | 0.496 |
ABY22151.1 | ABY22712.1 | RSal33209_0397 | RSal33209_0971 | DNA polymerase III, delta' subunit. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.542 |
ABY22151.1 | ABY22973.1 | RSal33209_0397 | RSal33209_1235 | DNA polymerase III, delta' subunit. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.616 |
ABY22151.1 | ABY23593.1 | RSal33209_0397 | RSal33209_1860 | DNA polymerase III, delta' subunit. | Conserved hypothetical protein. | 0.445 |
ABY22151.1 | ABY23669.1 | RSal33209_0397 | RSal33209_1936 | DNA polymerase III, delta' subunit. | DNA polymerase III, delta subunit. | 0.989 |
ABY22487.1 | ABY22151.1 | RSal33209_0740 | RSal33209_0397 | Hypothetical protein. | DNA polymerase III, delta' subunit. | 0.496 |
ABY22487.1 | ABY22711.1 | RSal33209_0740 | RSal33209_0970 | Hypothetical protein. | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | 0.562 |
ABY22487.1 | ABY22712.1 | RSal33209_0740 | RSal33209_0971 | Hypothetical protein. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.600 |
ABY22487.1 | ABY23413.1 | RSal33209_0740 | RSal33209_1677 | Hypothetical protein. | Methyltransferase. | 0.541 |
ABY22709.1 | ABY22711.1 | RSal33209_0968 | RSal33209_0970 | Predicted permease. | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | 0.572 |
ABY22709.1 | ABY22712.1 | RSal33209_0968 | RSal33209_0971 | Predicted permease. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.558 |
ABY22711.1 | ABY22487.1 | RSal33209_0970 | RSal33209_0740 | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.562 |
ABY22711.1 | ABY22709.1 | RSal33209_0970 | RSal33209_0968 | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | Predicted permease. | 0.572 |
ABY22711.1 | ABY22712.1 | RSal33209_0970 | RSal33209_0971 | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.859 |
ABY22712.1 | ABY22151.1 | RSal33209_0971 | RSal33209_0397 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | DNA polymerase III, delta' subunit. | 0.542 |
ABY22712.1 | ABY22487.1 | RSal33209_0971 | RSal33209_0740 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Hypothetical protein. | 0.600 |
ABY22712.1 | ABY22709.1 | RSal33209_0971 | RSal33209_0968 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Predicted permease. | 0.558 |
ABY22712.1 | ABY22711.1 | RSal33209_0971 | RSal33209_0970 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands. | 0.859 |
ABY22712.1 | ABY22973.1 | RSal33209_0971 | RSal33209_1235 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.424 |
ABY22712.1 | ABY23321.1 | RSal33209_0971 | RSal33209_1585 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | HesB protein family; Belongs to the HesB/IscA family. | 0.817 |
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