STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22785.1Multidrug transporter, MFS family; Partial, N-terminus. (131 aa)    
Predicted Functional Partners:
ABY22786.1
Multidrug transporter, MFS family.
     0.994
ABY23393.1
Putative transport protein; Partial, N-terminus.
  
     0.775
ABY22787.1
Multidrug transporter, MFS family; Partial, C-terminus.
       0.773
ABY22788.1
Transcriptional regulator, ArsR family.
       0.767
lmrB
Lincomycin resistance protein; Belongs to the major facilitator superfamily.
  
     0.763
ABY24562.1
Multidrug resistance protein B.
  
     0.761
ABY21954.1
Drug resistance transporter EmrB/QacA subfamily.
  
     0.753
ABY24581.1
Multidrug resistance protein B; Partial, N-terminus.
  
     0.753
ABY22784.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
   0.678
ABY25011.1
Transporter, MFS superfamily.
  
     0.655
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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