STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22883.1Glycine betaine transport system permease protein. (234 aa)    
Predicted Functional Partners:
ABY22882.1
Glycine betaine transport ATP-binding protein.
 
 0.996
ABY22885.1
Glycine betaine-binding protein.
 
 
 0.996
ABY23631.1
Glycine betaine transport ATP-binding protein.
 
 0.987
ABY23633.1
Glycine betaine-binding protein.
 
 0.980
ABY22884.1
Glycine betaine transport system permease protein.
 
  
0.953
ABY22886.1
Aspartate/alanine aminotransferase.
       0.516
cysA.1
Sulfate transport ATP-binding protein; Partial, C-terminus.
 
     0.414
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.