STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY22897.1Glyoxalase family protein; Partial, N-terminus. (99 aa)    
Predicted Functional Partners:
ABY22898.1
Glyoxalase family protein; Partial, C-terminus.
 
     0.946
ABY23528.1
5-amino-6-(5-phosphoribosylamino)uracil reductase.
 
    0.687
ABY22899.1
Conserved hypothetical protein.
  
    0.613
ychF
GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
  
    0.586
ABY22834.1
Conserved hypothetical protein.
 
    0.496
ABY22690.1
Nitroreductase family protein.
  
    0.481
ABY22059.1
Succinate dehydrogenase membrane anchor subunit.
   
    0.470
tadA
tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
   
    0.461
ABY23314.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
   
    0.435
ABY22895.1
RmuC family protein.
       0.427
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.