Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY21895.1 | ABY22519.1 | RSal33209_0139 | RSal33209_0772 | Peptide synthetase. | Non-ribosomal peptide synthetase; Partial, N-terminus. | 0.528 |
ABY21895.1 | ABY23570.1 | RSal33209_0139 | RSal33209_1837 | Peptide synthetase. | Indigoidine synthase. | 0.534 |
ABY21895.1 | ABY25048.1 | RSal33209_0139 | RSal33209_3337 | Peptide synthetase. | Linear gramicidin synthetase subunit C, putative. | 0.984 |
ABY21895.1 | ABY25052.1 | RSal33209_0139 | RSal33209_3341 | Peptide synthetase. | Peptide synthetase; Partial, C-terminus. | 0.532 |
ABY21895.1 | hemL | RSal33209_0139 | RSal33209_1227 | Peptide synthetase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.908 |
ABY22519.1 | ABY21895.1 | RSal33209_0772 | RSal33209_0139 | Non-ribosomal peptide synthetase; Partial, N-terminus. | Peptide synthetase. | 0.528 |
ABY22519.1 | ABY25048.1 | RSal33209_0772 | RSal33209_3337 | Non-ribosomal peptide synthetase; Partial, N-terminus. | Linear gramicidin synthetase subunit C, putative. | 0.949 |
ABY22519.1 | ABY25052.1 | RSal33209_0772 | RSal33209_3341 | Non-ribosomal peptide synthetase; Partial, N-terminus. | Peptide synthetase; Partial, C-terminus. | 0.546 |
ABY22519.1 | hemL | RSal33209_0772 | RSal33209_1227 | Non-ribosomal peptide synthetase; Partial, N-terminus. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.904 |
ABY22961.1 | ABY22963.1 | RSal33209_1223 | RSal33209_1225 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.999 |
ABY22961.1 | hemA | RSal33209_1223 | RSal33209_1218 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.995 |
ABY22961.1 | hemE | RSal33209_1223 | RSal33209_1219 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.980 |
ABY22961.1 | hemL | RSal33209_1223 | RSal33209_1227 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.986 |
ABY22963.1 | ABY22961.1 | RSal33209_1225 | RSal33209_1223 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
ABY22963.1 | hemA | RSal33209_1225 | RSal33209_1218 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.983 |
ABY22963.1 | hemE | RSal33209_1225 | RSal33209_1219 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.922 |
ABY22963.1 | hemL | RSal33209_1225 | RSal33209_1227 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.999 |
ABY23570.1 | ABY21895.1 | RSal33209_1837 | RSal33209_0139 | Indigoidine synthase. | Peptide synthetase. | 0.534 |
ABY23570.1 | ABY25048.1 | RSal33209_1837 | RSal33209_3337 | Indigoidine synthase. | Linear gramicidin synthetase subunit C, putative. | 0.977 |
ABY23570.1 | ABY25052.1 | RSal33209_1837 | RSal33209_3341 | Indigoidine synthase. | Peptide synthetase; Partial, C-terminus. | 0.560 |
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