STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23067.1Glucosamine--fructose-6-phosphate aminotransferase (isomerizing). (302 aa)    
Predicted Functional Partners:
ABY23069.1
Fructose/tagatose bisphosphate aldolase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.825
ABY23068.1
Putative glucokinase; Xylose repressor.
 
     0.806
ABY23070.1
Transcriptional regulator, DeoR family.
 
    0.795
ABY24505.1
Glucokinase; Partial, C-terminus; xylose repressor.
 
     0.683
ABY23064.1
Sialidase.
 
     0.680
ABY23065.1
Sialidase.
 
     0.659
ABY24604.1
N-acetylglucosamine/diacetylchitobiose-binding protein.
 
    0.648
ABY23063.1
Sialidase; Probably involved in the breakdown of mucin-type O-linked glycans. Specifically removes the T-antigen disaccharide (Gal-beta-1,3- GalNAc-alpha) from extracellular host glycoproteins.
 
     0.634
ABY23066.1
Sialidase; Partial, N-terminus.
       0.557
ABY24082.1
16S rRNA m(5)C 967 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
    0.485
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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